Introduction¶
fluff is a software package that allows for simple exploration, clustering and visualization of high-throughput sequencing experiments mapped to a reference genome. The package contains three command-line tools to generate publication-quality figures:
- heatmap: clustering and visualization in a heatmap
- bandplot: visualization of average profiles of clustered data in small multiples
- profile: creating genome browser-like genomic profiles
Quick Installation¶
The most straightforward way to install fluff is with conda using the bioconda channel (Python 2.7 only):
$ conda install biofluff -c bioconda
Quick Usage¶
See the quick examples in the Usage section.
Reference¶
If you find fluff useful, please cite:
Georgiou G, van Heeringen SJ. (2016) fluff: exploratory analysis and visualization of high-throughput sequencing data. PeerJ 4:e2209 doi: 10.7717/peerj.2209.